Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015918246.1_cds_XP_016467731.1_60446
CDS Infomation

[gene=LOC107790326] [db_xref=GeneID:107790326] [protein=4-coumarate--CoA ligase-like 9] [protein_id=XP_016467731.1] [location=join(3737..4753,5411..5600,6332..6477,6590..6657,7941..8043,8280..8405)] [gbkey=CDS]
Sequence

ATGGATCCAAGGAATGGCTATTGCCCACAAACTAAAACTTTCCATAGCCTAAGACAACCA
GTCCCATTGCCACCGTTAACAGAACCTCTTTCTATCATCCAATACACCCTCTCTCTTCTC
AACTCACCGACCACCGGAATCAATGTCAACGCCACCACTTTCCTTATTGACGCCACCACC
GGCCACCGCCTCTCTTACGCCGACTTCCTTCAAAAAATTCAATCTCTTGCTTCTTCTCTC
CAAACCCGTTTTCCTTCCCTTTCTAAAAACGATGTCGCTTTTGTTCTCTCCCCTCCTTCA
CCCCATATTCCAATTGTATACTTCGCACTCCTCTCTCTAGGGATTGTTGTTTCTCCAGCT
AATCCACTGTCTTCCACTGCCGAGGTAAGTCACATGATTCAGCTGTGTAAACCCGCCATT
GCTTTTGCAACTTCCTCTACTGCCGTTAAACTGCCGTCGCTTCCCCTTGGCACTATTCTA
CTCGATTCCCCTGAATTCCTCGCCATGATTCAAGCTCCCGTTTCTGCTCCCGTCTCTTAC
CCAATCATTCACCAGTCCGATTCAGCTGCTATTCTCTACTCTTCTGGAACTACTGGGAAA
GTAAAAGGTGTTGAGTTAACTCACCGGAATTTAATCGCGTTAATAACCGGTTTGTACTAC
AACAAATTCAATAATGCTGCTGATGAAGGTGAAAAGGCGGAGCAAGAGGTGTCGTTCATG
ACGTTGCCGATGTTTCACGTGTTTGGATTTTTTATGCTTATTAGATTAGCGGCGTTCGGG
GAGACTGTGGTGATAATTGAGAGATTTGATTTCGAGAAGATGTTGGAGGCGGTGGAGAAG
TACAGAGTTACGTACATCCCAGTGTCGCCGCCACTGGTGGTGGCAATGGCGAAGTCGGAT
TTGGCGTTGAAGTATGATCTCAGCTCACTGAAGCTGCTGGCGTGCGGCGGAGCGCCGCTG
GGGAAGGAGGTGGCAGAGCGGTTCAAGAGCAGGTTCCCTAACGTGATGATAATACAAGGA
TATGGTCTGACCGAGACTACTGGAGGAGCAACAGGGATGAGTGGCCCTGAGGAATCAGAC
CGGTATGGATCTGCTGGTCGCCTTGCTGTGAATGCGGAAGCTAAGATTGTTGATCCTGAT
AGTGGAGAGACCTTACCTCCTGGCCAGCGTGGAGAGCTTTGGATACGTGGGCCAACAATC
ATGAAAGGCTATGTTGGAGATAAACAAGCAACCTCAGCAACACTCGATTCAGAAGGTTGG
CTGAAAACTGGCGATCTCTGCTATTTTGATGCAGATGGGTTTCTATATGTTGTCGATAGG
TTAAAAGAACTGATAAAGTACAAGGCGTATCAGGTACCCCCTGCTGAACTTGAACATTTG
CTTCAATCAATTCCTGATGTTGCTGATGCAGCAGTTATTCCATATCCCGATGAAGAAGCA
GGGGAGATTCCTATGGCTTATATAGTCAGAAGACCAGGAAGCACTATTAGTGAGTCGCAA
ATTATAGATGCCATCGCAAAACAGGTGGCACCATACAAAAAGATACGGCGTGTTGCATTC
ATCAACGCAATACCAAAATCTCCAGCAGGAAAGATTTTGAGAAGAGAACTCGTTAATCAT
GCCTCTAGTGGTGCTTCTGCAAGATTATGA

Peptide Sequence

PEP ID

XP_016467731.1
PEP Infomation

PREDICTED: 4-coumarate--CoA ligase-like 9 [Nicotiana tabacum]
Sequence

MDPRNGYCPQTKTFHSLRQPVPLPPLTEPLSIIQYTLSLLNSPTTGINVNATTFLIDATT
GHRLSYADFLQKIQSLASSLQTRFPSLSKNDVAFVLSPPSPHIPIVYFALLSLGIVVSPA
NPLSSTAEVSHMIQLCKPAIAFATSSTAVKLPSLPLGTILLDSPEFLAMIQAPVSAPVSY
PIIHQSDSAAILYSSGTTGKVKGVELTHRNLIALITGLYYNKFNNAADEGEKAEQEVSFM
TLPMFHVFGFFMLIRLAAFGETVVIIERFDFEKMLEAVEKYRVTYIPVSPPLVVAMAKSD
LALKYDLSSLKLLACGGAPLGKEVAERFKSRFPNVMIIQGYGLTETTGGATGMSGPEESD
RYGSAGRLAVNAEAKIVDPDSGETLPPGQRGELWIRGPTIMKGYVGDKQATSATLDSEGW
LKTGDLCYFDADGFLYVVDRLKELIKYKAYQVPPAELEHLLQSIPDVADAAVIPYPDEEA
GEIPMAYIVRRPGSTISESQIIDAIAKQVAPYKKIRRVAFINAIPKSPAGKILRRELVNH
ASSGASARL

Transcript Sequence

Gene sequence data has not been registered.